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2008
1.
Amaral-Zettler L., J. Peplies, A. Ramette, B. Fuchs,
W. Ludwig, and F. O. Glöckner.
Proceedings of the international workshop on Ribosomal RNA technology,
April 7-9, 2008, Bremen, Germany.
 Systematic
and Applied Microbiology 2008, 31:258-68
doi:10.1016/j.syapm.2008.08.004
link to project webpage:
http://www.arb-silva.de/projects/rrna-workshop/
2.
Peplies J., R. Kottmann, W. Ludwig, and F. O. Glöckner.
A Standard Operating Procedure for Phylogenetic
Inference (SOPPI) using (rRNA) marker genes.
Systematic
and Applied Microbiology 2008, 31:251-7
doi: 10.1016/j.syapm.2008.08.003
link to project webpage:
http://www.arb-silva.de/projects/soppi
3.
Yarza P., M. Richter, J. Peplies, J. Euzeby, R. Amann, K. H. Schleifer,
W. Ludwig, F. O. Glöckner,
and R. Rossello-Mora.
The All-Species Living Tree Project: a 16S
rRNA-based phylogenetic tree of all sequenced type strains.
Systematic
and Applied Microbiology 2008, 31:241-50
doi: 10.1016/j.syapm.2008.07.001
link to project webpage:
http://www.arb-silva.de/projects/living-tree
4.
Richter M., T. Lombardot, I. Kostadinov, R. Kottmann, M. B. Duhaime, J.
Peplies,
and F. O. Glöckner.
JCoast - A biologist-centric software tool
for
data mining and comparison of prokaryotic
(meta)genomes.
BMC
Bioinformatics 2008, 9:177
doi: 10.1186/1471-2105-9-177
link to software:
http://www.megx.net/jcoast
2007
1. Pruesse E., C.
Quast, K. Knittel, B. Fuchs, W. Ludwig, J. Peplies, and F. O. Glöckner.
SILVA: a comprehensive online resource
for quality checked and aligned ribosomal RNA sequence data
compatible with ARB.
Nuc.
Acids Res. 2007; Vol. 35:7188-96
doi: 10.1093/nar/gkm864
link to database: http://www.arb-silva.de
Additional studies/projects
Ribocon is involved in as a scientific partner are currently
under review.
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